Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.29■□□□□ 0.36
Nod1Q8BHB0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nod1Q8BHB0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nod1Q8BHB0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nod1Q8BHB0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nod1Q8BHB0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nod1Q8BHB0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.28■□□□□ 0.36
Nod1Q8BHB0 Mir5131-201ENSMUST00000175426 93 ntBASIC17.28■□□□□ 0.36
Nod1Q8BHB0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nod1Q8BHB0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nod1Q8BHB0 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.28■□□□□ 0.36
Nod1Q8BHB0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.28■□□□□ 0.36
Nod1Q8BHB0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nod1Q8BHB0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nod1Q8BHB0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nod1Q8BHB0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nod1Q8BHB0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm44357-201ENSMUST00000195897 142 ntBASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm19658-201ENSMUST00000196231 138 ntBASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm44367-201ENSMUST00000196836 138 ntBASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm44350-201ENSMUST00000197197 138 ntBASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm44390-201ENSMUST00000197533 144 ntBASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm44313-201ENSMUST00000198018 138 ntBASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm44486-201ENSMUST00000198508 138 ntBASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm44314-201ENSMUST00000199263 138 ntBASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm44394-201ENSMUST00000199558 138 ntBASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm44484-201ENSMUST00000199873 138 ntBASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm44466-201ENSMUST00000200264 138 ntBASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gm44359-201ENSMUST00000200671 138 ntBASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nod1Q8BHB0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nod1Q8BHB0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nod1Q8BHB0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nod1Q8BHB0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Nod1Q8BHB0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nod1Q8BHB0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nod1Q8BHB0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nod1Q8BHB0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nod1Q8BHB0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nod1Q8BHB0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nod1Q8BHB0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.24■□□□□ 0.35
Nod1Q8BHB0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nod1Q8BHB0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms