Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Gm7977-201ENSMUST00000193787 748 ntBASIC19.32■□□□□ 0.68
Samm50Q8BGH2 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Samm50Q8BGH2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Gm17661-201ENSMUST00000170317 270 ntBASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Gm45058-201ENSMUST00000205810 766 ntBASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Il3ra-202ENSMUST00000223589 738 ntBASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Samm50Q8BGH2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Samm50Q8BGH2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Samm50Q8BGH2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Samm50Q8BGH2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Samm50Q8BGH2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Samm50Q8BGH2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.3■□□□□ 0.68
Samm50Q8BGH2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Samm50Q8BGH2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Samm50Q8BGH2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Samm50Q8BGH2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Samm50Q8BGH2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Samm50Q8BGH2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Gm16061-201ENSMUST00000122167 857 ntBASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms