Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim50Q810I2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim50Q810I2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Gm11336-201ENSMUST00000118168 334 ntBASIC16.04■□□□□ 0.16
Trim50Q810I2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim50Q810I2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.04■□□□□ 0.16
Trim50Q810I2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim50Q810I2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.04■□□□□ 0.16
Trim50Q810I2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim50Q810I2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim50Q810I2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trim50Q810I2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim50Q810I2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim50Q810I2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim50Q810I2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.03■□□□□ 0.16
Trim50Q810I2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim50Q810I2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trim50Q810I2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Trim50Q810I2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Trim50Q810I2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim50Q810I2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.03■□□□□ 0.16
Trim50Q810I2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim50Q810I2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trim50Q810I2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim50Q810I2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim50Q810I2 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.03■□□□□ 0.16
Trim50Q810I2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim50Q810I2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim50Q810I2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim50Q810I2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim50Q810I2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim50Q810I2 Haglr-201ENSMUST00000100000 2085 ntBASIC16.03■□□□□ 0.16
Trim50Q810I2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trim50Q810I2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.02■□□□□ 0.16
Trim50Q810I2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim50Q810I2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim50Q810I2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.02■□□□□ 0.16
Trim50Q810I2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim50Q810I2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim50Q810I2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim50Q810I2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim50Q810I2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim50Q810I2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim50Q810I2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim50Q810I2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trim50Q810I2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trim50Q810I2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim50Q810I2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim50Q810I2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim50Q810I2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trim50Q810I2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim50Q810I2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.02■□□□□ 0.15
Trim50Q810I2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Trim50Q810I2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim50Q810I2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim50Q810I2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim50Q810I2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim50Q810I2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim50Q810I2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trim50Q810I2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim50Q810I2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim50Q810I2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Trim50Q810I2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trim50Q810I2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim50Q810I2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Trim50Q810I2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim50Q810I2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim50Q810I2 Gm10013-201ENSMUST00000106074 672 ntBASIC16.01■□□□□ 0.15
Trim50Q810I2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trim50Q810I2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.01■□□□□ 0.15
Trim50Q810I2 Gm18421-201ENSMUST00000204122 625 ntBASIC16.01■□□□□ 0.15
Trim50Q810I2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim50Q810I2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim50Q810I2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Trim50Q810I2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim50Q810I2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim50Q810I2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim50Q810I2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms