Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.68■□□□□ 0.1
Vrk1Q80X41 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vrk1Q80X41 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Gm44430-201ENSMUST00000203376 995 ntBASIC15.67■□□□□ 0.1
Vrk1Q80X41 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.67■□□□□ 0.1
Vrk1Q80X41 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.66■□□□□ 0.1
Vrk1Q80X41 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.66■□□□□ 0.1
Vrk1Q80X41 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.66■□□□□ 0.1
Vrk1Q80X41 AW822252-206ENSMUST00000208904 237 ntBASIC15.66■□□□□ 0.1
Vrk1Q80X41 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Rps4l-201ENSMUST00000071745 943 ntBASIC15.66■□□□□ 0.1
Vrk1Q80X41 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.66■□□□□ 0.1
Vrk1Q80X41 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vrk1Q80X41 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk1Q80X41 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.65■□□□□ 0.1
Vrk1Q80X41 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.65■□□□□ 0.1
Vrk1Q80X41 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Vrk1Q80X41 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.65■□□□□ 0.1
Vrk1Q80X41 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.65■□□□□ 0.1
Vrk1Q80X41 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.65■□□□□ 0.1
Vrk1Q80X41 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vrk1Q80X41 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Vrk1Q80X41 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.64■□□□□ 0.09
Vrk1Q80X41 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vrk1Q80X41 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Vrk1Q80X41 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vrk1Q80X41 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Vrk1Q80X41 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vrk1Q80X41 Gm15165-201ENSMUST00000118140 502 ntBASIC15.64■□□□□ 0.09
Vrk1Q80X41 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vrk1Q80X41 Gm27867-201ENSMUST00000184778 125 ntBASIC15.64■□□□□ 0.09
Vrk1Q80X41 Gm44454-201ENSMUST00000198541 138 ntBASIC15.64■□□□□ 0.09
Vrk1Q80X41 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vrk1Q80X41 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Vrk1Q80X41 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vrk1Q80X41 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Vrk1Q80X41 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Vrk1Q80X41 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vrk1Q80X41 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms