Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim62Q80V85 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim62Q80V85 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim62Q80V85 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim62Q80V85 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim62Q80V85 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim62Q80V85 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim62Q80V85 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim62Q80V85 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim62Q80V85 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim62Q80V85 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim62Q80V85 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.02■□□□□ 0.32
Trim62Q80V85 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim62Q80V85 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim62Q80V85 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim62Q80V85 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim62Q80V85 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trim62Q80V85 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Trim62Q80V85 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim62Q80V85 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim62Q80V85 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim62Q80V85 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trim62Q80V85 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim62Q80V85 Gm36967-201ENSMUST00000193814 266 ntBASIC17.02■□□□□ 0.32
Trim62Q80V85 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim62Q80V85 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim62Q80V85 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim62Q80V85 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim62Q80V85 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim62Q80V85 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trim62Q80V85 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim62Q80V85 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim62Q80V85 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim62Q80V85 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.01■□□□□ 0.31
Trim62Q80V85 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.01■□□□□ 0.31
Trim62Q80V85 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Trim62Q80V85 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trim62Q80V85 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim62Q80V85 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim62Q80V85 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim62Q80V85 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 Gm27742-201ENSMUST00000184667 60 ntBASIC17■□□□□ 0.31
Trim62Q80V85 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim62Q80V85 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim62Q80V85 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.99■□□□□ 0.31
Trim62Q80V85 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim62Q80V85 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim62Q80V85 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim62Q80V85 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim62Q80V85 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim62Q80V85 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim62Q80V85 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.99■□□□□ 0.31
Trim62Q80V85 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim62Q80V85 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trim62Q80V85 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim62Q80V85 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim62Q80V85 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim62Q80V85 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim62Q80V85 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim62Q80V85 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trim62Q80V85 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim62Q80V85 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Trim62Q80V85 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim62Q80V85 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms