Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Prpf38bQ80SY5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.16■□□□□ 0.34
Prpf38bQ80SY5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Gm10576-201ENSMUST00000191927 825 ntBASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.15■□□□□ 0.34
Prpf38bQ80SY5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Prpf38bQ80SY5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf38bQ80SY5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf38bQ80SY5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms