Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Odf3b-204ENSMUST00000227834 930 ntBASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Otub1Q7TQI3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Gm21814-202ENSMUST00000203277 873 ntBASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Otub1Q7TQI3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Il3ra-202ENSMUST00000223589 738 ntBASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Otub1Q7TQI3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Gm37055-201ENSMUST00000191866 133 ntBASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Otub1Q7TQI3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms