Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Gm44450-201ENSMUST00000199528 114 ntBASIC16.04■□□□□ 0.16
Scn4bQ7M729 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Scn4bQ7M729 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn4bQ7M729 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Scn4bQ7M729 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Mir1668-201ENSMUST00000184114 107 ntBASIC16.03■□□□□ 0.16
Scn4bQ7M729 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.03■□□□□ 0.16
Scn4bQ7M729 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn4bQ7M729 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Gm11336-201ENSMUST00000118168 334 ntBASIC16.02■□□□□ 0.16
Scn4bQ7M729 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Gm26039-201ENSMUST00000158152 144 ntBASIC16.02■□□□□ 0.16
Scn4bQ7M729 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn4bQ7M729 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.02■□□□□ 0.15
Scn4bQ7M729 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.01■□□□□ 0.15
Scn4bQ7M729 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scn4bQ7M729 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Scn4bQ7M729 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scn4bQ7M729 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scn4bQ7M729 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms