Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Gm27494-201ENSMUST00000184735 189 ntBASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn10aQ6QIY3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Gm11025-201ENSMUST00000140773 466 ntBASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Mir6956-201ENSMUST00000183598 62 ntBASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn10aQ6QIY3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm4518-201ENSMUST00000182638 718 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Gm9682-201ENSMUST00000197505 556 ntBASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn10aQ6QIY3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn10aQ6QIY3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
Scn10aQ6QIY3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn10aQ6QIY3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn10aQ6QIY3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.52■□□□□ 0.56
Scn10aQ6QIY3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn10aQ6QIY3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.52■□□□□ 0.56
Scn10aQ6QIY3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn10aQ6QIY3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Scn10aQ6QIY3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn10aQ6QIY3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn10aQ6QIY3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn10aQ6QIY3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn10aQ6QIY3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Scn10aQ6QIY3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn10aQ6QIY3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Gm13616-201ENSMUST00000120600 222 ntBASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Gm45612-201ENSMUST00000211320 160 ntBASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Gm14057-201ENSMUST00000120631 482 ntBASIC18.51■□□□□ 0.55
Scn10aQ6QIY3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms