Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ddx58Q6Q899 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx58Q6Q899 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.31■□□□□ 0.84
Ddx58Q6Q899 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ddx58Q6Q899 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.31■□□□□ 0.84
Ddx58Q6Q899 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx58Q6Q899 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ddx58Q6Q899 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx58Q6Q899 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx58Q6Q899 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx58Q6Q899 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx58Q6Q899 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx58Q6Q899 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.3■□□□□ 0.84
Ddx58Q6Q899 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.3■□□□□ 0.84
Ddx58Q6Q899 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.3■□□□□ 0.84
Ddx58Q6Q899 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx58Q6Q899 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.3■□□□□ 0.84
Ddx58Q6Q899 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx58Q6Q899 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx58Q6Q899 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ddx58Q6Q899 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx58Q6Q899 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx58Q6Q899 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx58Q6Q899 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx58Q6Q899 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.29■□□□□ 0.84
Ddx58Q6Q899 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx58Q6Q899 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ddx58Q6Q899 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx58Q6Q899 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ddx58Q6Q899 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx58Q6Q899 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx58Q6Q899 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.27■□□□□ 0.84
Ddx58Q6Q899 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Ddx58Q6Q899 Gm11452-201ENSMUST00000122376 690 ntBASIC20.27■□□□□ 0.84
Ddx58Q6Q899 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx58Q6Q899 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.27■□□□□ 0.84
Ddx58Q6Q899 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx58Q6Q899 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ddx58Q6Q899 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx58Q6Q899 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ddx58Q6Q899 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.27■□□□□ 0.83
Ddx58Q6Q899 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Rps4l-201ENSMUST00000071745 943 ntBASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx58Q6Q899 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx58Q6Q899 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx58Q6Q899 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms