Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Snrnp40Q6PE01 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Snrnp40Q6PE01 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.46□□□□□ -0.1
Snrnp40Q6PE01 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Snrnp40Q6PE01 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Snrnp40Q6PE01 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Snrnp40Q6PE01 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.46□□□□□ -0.1
Snrnp40Q6PE01 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Snrnp40Q6PE01 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Gm8655-201ENSMUST00000221159 852 ntBASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Snrnp40Q6PE01 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Snrnp40Q6PE01 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Snrnp40Q6PE01 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snrnp40Q6PE01 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms