Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col7a1Q63870 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col7a1Q63870 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col7a1Q63870 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.61□□□□□ -0.23
Col7a1Q63870 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Gm13453-201ENSMUST00000118708 357 ntBASIC13.61□□□□□ -0.23
Col7a1Q63870 Gm12138-201ENSMUST00000122180 951 ntBASIC13.61□□□□□ -0.23
Col7a1Q63870 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.61□□□□□ -0.23
Col7a1Q63870 Gm18062-201ENSMUST00000208020 547 ntBASIC13.61□□□□□ -0.23
Col7a1Q63870 Gm18055-201ENSMUST00000208254 547 ntBASIC13.61□□□□□ -0.23
Col7a1Q63870 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col7a1Q63870 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.61□□□□□ -0.23
Col7a1Q63870 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.61□□□□□ -0.23
Col7a1Q63870 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Hsf1-207ENSMUST00000228371 2102 ntBASIC13.61□□□□□ -0.23
Col7a1Q63870 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col7a1Q63870 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Col7a1Q63870 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.61□□□□□ -0.23
Col7a1Q63870 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.61□□□□□ -0.23
Col7a1Q63870 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col7a1Q63870 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col7a1Q63870 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col7a1Q63870 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col7a1Q63870 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col7a1Q63870 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col7a1Q63870 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col7a1Q63870 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col7a1Q63870 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col7a1Q63870 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col7a1Q63870 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col7a1Q63870 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col7a1Q63870 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Gm25287-201ENSMUST00000103846 110 ntBASIC13.6□□□□□ -0.23
Col7a1Q63870 Gm22918-201ENSMUST00000103855 110 ntBASIC13.6□□□□□ -0.23
Col7a1Q63870 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col7a1Q63870 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col7a1Q63870 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col7a1Q63870 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col7a1Q63870 Gm13829-201ENSMUST00000119600 138 ntBASIC13.59□□□□□ -0.23
Col7a1Q63870 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.59□□□□□ -0.23
Col7a1Q63870 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.59□□□□□ -0.23
Col7a1Q63870 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.59□□□□□ -0.23
Col7a1Q63870 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.59□□□□□ -0.23
Col7a1Q63870 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col7a1Q63870 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col7a1Q63870 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col7a1Q63870 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Col7a1Q63870 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col7a1Q63870 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Col7a1Q63870 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col7a1Q63870 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.59□□□□□ -0.23
Col7a1Q63870 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.59□□□□□ -0.23
Col7a1Q63870 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col7a1Q63870 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.59□□□□□ -0.23
Col7a1Q63870 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Col7a1Q63870 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col7a1Q63870 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col7a1Q63870 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col7a1Q63870 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.58□□□□□ -0.23
Col7a1Q63870 Gm37153-201ENSMUST00000193637 231 ntBASIC13.58□□□□□ -0.24
Col7a1Q63870 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col7a1Q63870 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.58□□□□□ -0.24
Col7a1Q63870 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col7a1Q63870 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col7a1Q63870 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col7a1Q63870 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.58□□□□□ -0.24
Col7a1Q63870 Gm27618-201ENSMUST00000183671 60 ntBASIC13.58□□□□□ -0.24
Col7a1Q63870 Gm9794-201ENSMUST00000202370 423 ntBASIC13.58□□□□□ -0.24
Col7a1Q63870 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col7a1Q63870 Gm7730-201ENSMUST00000212486 454 ntBASIC13.58□□□□□ -0.24
Col7a1Q63870 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col7a1Q63870 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col7a1Q63870 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col7a1Q63870 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms