Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Sox16Q62247 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Sox16Q62247 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sox16Q62247 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sox16Q62247 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.92
Sox16Q62247 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.92
Sox16Q62247 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Sox16Q62247 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Gm11841-201ENSMUST00000117060 1963 ntBASIC9.33□□□□□ -0.92
Sox16Q62247 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC9.33□□□□□ -0.92
Sox16Q62247 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC9.33□□□□□ -0.92
Sox16Q62247 AC166822.3-201ENSMUST00000227394 661 ntBASIC9.33□□□□□ -0.92
Sox16Q62247 Sorbs3-204ENSMUST00000227929 2460 ntBASIC9.33□□□□□ -0.92
Sox16Q62247 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Sox16Q62247 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC9.33□□□□□ -0.92
Sox16Q62247 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC9.33□□□□□ -0.92
Sox16Q62247 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Sox16Q62247 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sox16Q62247 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Sox16Q62247 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Sox16Q62247 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
Sox16Q62247 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Sox16Q62247 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Sox16Q62247 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC9.32□□□□□ -0.92
Sox16Q62247 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 CT030684.3-201ENSMUST00000227308 2445 ntBASIC9.32□□□□□ -0.92
Sox16Q62247 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sox16Q62247 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC9.31□□□□□ -0.92
Sox16Q62247 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Sox16Q62247 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Sox16Q62247 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Sox16Q62247 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sox16Q62247 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Sox16Q62247 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 355.5 ms