Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.36■□□□□ 0.69
Ctr9Q62018 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Ctr9Q62018 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.36■□□□□ 0.69
Ctr9Q62018 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ctr9Q62018 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctr9Q62018 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ctr9Q62018 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctr9Q62018 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctr9Q62018 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ctr9Q62018 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctr9Q62018 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ctr9Q62018 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.35■□□□□ 0.69
Ctr9Q62018 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ctr9Q62018 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ctr9Q62018 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.35■□□□□ 0.69
Ctr9Q62018 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Ctr9Q62018 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ctr9Q62018 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.35■□□□□ 0.69
Ctr9Q62018 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctr9Q62018 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctr9Q62018 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctr9Q62018 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.35■□□□□ 0.69
Ctr9Q62018 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctr9Q62018 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctr9Q62018 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ctr9Q62018 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctr9Q62018 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctr9Q62018 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctr9Q62018 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctr9Q62018 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ctr9Q62018 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctr9Q62018 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctr9Q62018 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ctr9Q62018 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.34■□□□□ 0.69
Ctr9Q62018 Gm10052-201ENSMUST00000168019 960 ntBASIC19.34■□□□□ 0.69
Ctr9Q62018 Gm44430-201ENSMUST00000203376 995 ntBASIC19.34■□□□□ 0.69
Ctr9Q62018 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctr9Q62018 Gm7729-201ENSMUST00000050143 801 ntBASIC19.34■□□□□ 0.69
Ctr9Q62018 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctr9Q62018 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ctr9Q62018 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ctr9Q62018 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ctr9Q62018 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ctr9Q62018 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ctr9Q62018 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctr9Q62018 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctr9Q62018 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctr9Q62018 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctr9Q62018 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctr9Q62018 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctr9Q62018 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ctr9Q62018 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.33■□□□□ 0.68
Ctr9Q62018 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.33■□□□□ 0.68
Ctr9Q62018 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctr9Q62018 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctr9Q62018 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctr9Q62018 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctr9Q62018 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctr9Q62018 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctr9Q62018 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctr9Q62018 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctr9Q62018 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctr9Q62018 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Ctr9Q62018 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctr9Q62018 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctr9Q62018 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctr9Q62018 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctr9Q62018 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.32■□□□□ 0.68
Ctr9Q62018 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.32■□□□□ 0.68
Ctr9Q62018 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Ctr9Q62018 Gm27741-201ENSMUST00000185060 237 ntBASIC19.32■□□□□ 0.68
Ctr9Q62018 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.32■□□□□ 0.68
Ctr9Q62018 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctr9Q62018 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.32■□□□□ 0.68
Ctr9Q62018 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctr9Q62018 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ctr9Q62018 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctr9Q62018 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctr9Q62018 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctr9Q62018 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ctr9Q62018 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctr9Q62018 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctr9Q62018 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctr9Q62018 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctr9Q62018 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ctr9Q62018 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctr9Q62018 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctr9Q62018 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms