Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd1Q61466 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd1Q61466 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd1Q61466 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.13■□□□□ 0.33
Smarcd1Q61466 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd1Q61466 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Smarcd1Q61466 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smarcd1Q61466 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd1Q61466 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smarcd1Q61466 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd1Q61466 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Smarcd1Q61466 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Gm13312-201ENSMUST00000119631 718 ntBASIC17.12■□□□□ 0.33
Smarcd1Q61466 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Gm36967-201ENSMUST00000193814 266 ntBASIC17.12■□□□□ 0.33
Smarcd1Q61466 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd1Q61466 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.12■□□□□ 0.33
Smarcd1Q61466 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smarcd1Q61466 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smarcd1Q61466 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.11■□□□□ 0.33
Smarcd1Q61466 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Smarcd1Q61466 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd1Q61466 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Gm13216-201ENSMUST00000117145 591 ntBASIC17.1■□□□□ 0.33
Smarcd1Q61466 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.1■□□□□ 0.33
Smarcd1Q61466 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd1Q61466 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Rprl3-201ENSMUST00000157400 290 ntBASIC17.09■□□□□ 0.33
Smarcd1Q61466 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarcd1Q61466 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms