Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1eQ61290 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Cacna1eQ61290 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.11■□□□□ 0.17
Cacna1eQ61290 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.11■□□□□ 0.17
Cacna1eQ61290 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.11■□□□□ 0.17
Cacna1eQ61290 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.11■□□□□ 0.17
Cacna1eQ61290 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cacna1eQ61290 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.11■□□□□ 0.17
Cacna1eQ61290 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1eQ61290 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cacna1eQ61290 Gm8000-201ENSMUST00000188378 592 ntBASIC16.11■□□□□ 0.17
Cacna1eQ61290 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1eQ61290 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.11■□□□□ 0.17
Cacna1eQ61290 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.11■□□□□ 0.17
Cacna1eQ61290 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1eQ61290 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1eQ61290 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.11■□□□□ 0.17
Cacna1eQ61290 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1eQ61290 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1eQ61290 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.1■□□□□ 0.17
Cacna1eQ61290 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.1■□□□□ 0.17
Cacna1eQ61290 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Cacna1eQ61290 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1eQ61290 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Gm12260-201ENSMUST00000122447 411 ntBASIC16.1■□□□□ 0.17
Cacna1eQ61290 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1eQ61290 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Gm8097-201ENSMUST00000117903 829 ntBASIC16.09■□□□□ 0.17
Cacna1eQ61290 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1eQ61290 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1eQ61290 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1eQ61290 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.08■□□□□ 0.17
Cacna1eQ61290 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1eQ61290 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.08■□□□□ 0.17
Cacna1eQ61290 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1eQ61290 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.08■□□□□ 0.16
Cacna1eQ61290 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1eQ61290 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1eQ61290 Gm11764-201ENSMUST00000120221 623 ntBASIC16.08■□□□□ 0.16
Cacna1eQ61290 Gm25911-201ENSMUST00000157621 56 ntBASIC16.08■□□□□ 0.16
Cacna1eQ61290 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.08■□□□□ 0.16
Cacna1eQ61290 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cacna1eQ61290 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.08■□□□□ 0.16
Cacna1eQ61290 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1eQ61290 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1eQ61290 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1eQ61290 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1eQ61290 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1eQ61290 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cacna1eQ61290 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.08■□□□□ 0.16
Cacna1eQ61290 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1eQ61290 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cacna1eQ61290 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1eQ61290 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.07■□□□□ 0.16
Cacna1eQ61290 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1eQ61290 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1eQ61290 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms