Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Col11a1Q61245 AA543401-201ENSMUST00000164248 1269 ntBASIC18.35■□□□□ 0.53
Col11a1Q61245 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Col11a1Q61245 Gm9682-201ENSMUST00000197505 556 ntBASIC18.35■□□□□ 0.53
Col11a1Q61245 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Col11a1Q61245 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Col11a1Q61245 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Col11a1Q61245 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.35■□□□□ 0.53
Col11a1Q61245 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.35■□□□□ 0.53
Col11a1Q61245 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.35■□□□□ 0.53
Col11a1Q61245 Gm8344-201ENSMUST00000119813 856 ntBASIC18.35■□□□□ 0.53
Col11a1Q61245 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Col11a1Q61245 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Col11a1Q61245 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.35■□□□□ 0.53
Col11a1Q61245 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col11a1Q61245 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col11a1Q61245 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.34■□□□□ 0.53
Col11a1Q61245 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col11a1Q61245 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col11a1Q61245 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col11a1Q61245 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col11a1Q61245 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Col11a1Q61245 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col11a1Q61245 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Col11a1Q61245 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a1Q61245 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a1Q61245 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.33■□□□□ 0.53
Col11a1Q61245 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a1Q61245 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.33■□□□□ 0.53
Col11a1Q61245 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.33■□□□□ 0.53
Col11a1Q61245 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a1Q61245 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a1Q61245 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a1Q61245 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a1Q61245 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col11a1Q61245 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a1Q61245 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a1Q61245 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a1Q61245 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Col11a1Q61245 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a1Q61245 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a1Q61245 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a1Q61245 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a1Q61245 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a1Q61245 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Col11a1Q61245 Gm15427-201ENSMUST00000117288 531 ntBASIC18.33■□□□□ 0.52
Col11a1Q61245 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.33■□□□□ 0.52
Col11a1Q61245 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a1Q61245 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col11a1Q61245 Gm5177-201ENSMUST00000183092 997 ntBASIC18.33■□□□□ 0.52
Col11a1Q61245 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a1Q61245 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a1Q61245 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a1Q61245 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a1Q61245 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a1Q61245 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a1Q61245 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a1Q61245 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Col11a1Q61245 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a1Q61245 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a1Q61245 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.32■□□□□ 0.52
Col11a1Q61245 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Mir1895-201ENSMUST00000122615 79 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm4518-201ENSMUST00000182638 718 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.32■□□□□ 0.52
Col11a1Q61245 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col11a1Q61245 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.32■□□□□ 0.52
Col11a1Q61245 Gm20949-201ENSMUST00000206478 952 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms