Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Irf9Q61179 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Irf9Q61179 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Irf9Q61179 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Irf9Q61179 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Irf9Q61179 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Irf9Q61179 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Irf9Q61179 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Irf9Q61179 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Irf9Q61179 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Irf9Q61179 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Irf9Q61179 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf9Q61179 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf9Q61179 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Irf9Q61179 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf9Q61179 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Irf9Q61179 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf9Q61179 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf9Q61179 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf9Q61179 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Irf9Q61179 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.42■□□□□ 0.86
Irf9Q61179 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.42■□□□□ 0.86
Irf9Q61179 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.42■□□□□ 0.86
Irf9Q61179 Mzt1-203ENSMUST00000227948 952 ntBASIC20.42■□□□□ 0.86
Irf9Q61179 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf9Q61179 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf9Q61179 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Irf9Q61179 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Irf9Q61179 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf9Q61179 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf9Q61179 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Irf9Q61179 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Irf9Q61179 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.41■□□□□ 0.86
Irf9Q61179 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.41■□□□□ 0.86
Irf9Q61179 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Irf9Q61179 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Irf9Q61179 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.41■□□□□ 0.86
Irf9Q61179 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Irf9Q61179 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.41■□□□□ 0.86
Irf9Q61179 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Irf9Q61179 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Irf9Q61179 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Irf9Q61179 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Irf9Q61179 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.41■□□□□ 0.86
Irf9Q61179 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf9Q61179 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf9Q61179 Gm11452-201ENSMUST00000122376 690 ntBASIC20.4■□□□□ 0.86
Irf9Q61179 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Irf9Q61179 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.4■□□□□ 0.86
Irf9Q61179 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf9Q61179 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.4■□□□□ 0.86
Irf9Q61179 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf9Q61179 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.4■□□□□ 0.86
Irf9Q61179 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf9Q61179 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf9Q61179 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Irf9Q61179 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf9Q61179 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Irf9Q61179 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf9Q61179 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Irf9Q61179 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Irf9Q61179 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Irf9Q61179 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
Irf9Q61179 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Irf9Q61179 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.39■□□□□ 0.86
Irf9Q61179 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Irf9Q61179 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Irf9Q61179 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Irf9Q61179 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf9Q61179 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf9Q61179 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.39■□□□□ 0.85
Irf9Q61179 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf9Q61179 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf9Q61179 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.39■□□□□ 0.85
Irf9Q61179 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.39■□□□□ 0.85
Irf9Q61179 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.39■□□□□ 0.85
Irf9Q61179 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.39■□□□□ 0.85
Irf9Q61179 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.39■□□□□ 0.85
Irf9Q61179 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.39■□□□□ 0.85
Irf9Q61179 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf9Q61179 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf9Q61179 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf9Q61179 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Irf9Q61179 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Irf9Q61179 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf9Q61179 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.38■□□□□ 0.85
Irf9Q61179 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf9Q61179 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf9Q61179 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Irf9Q61179 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.38■□□□□ 0.85
Irf9Q61179 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf9Q61179 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Irf9Q61179 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Irf9Q61179 Gm25745-201ENSMUST00000174945 133 ntBASIC20.38■□□□□ 0.85
Irf9Q61179 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Irf9Q61179 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf9Q61179 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Irf9Q61179 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf9Q61179 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Irf9Q61179 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms