Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scaf1Q5U4C3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC21.41■■□□□ 1.02
Scaf1Q5U4C3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC21.41■■□□□ 1.02
Scaf1Q5U4C3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Scaf1Q5U4C3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scaf1Q5U4C3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scaf1Q5U4C3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scaf1Q5U4C3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Scaf1Q5U4C3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Gm11779-201ENSMUST00000118541 368 ntBASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Scaf1Q5U4C3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scaf1Q5U4C3 Gm37500-201ENSMUST00000192059 1443 ntBASIC21.39■■□□□ 1.02
Scaf1Q5U4C3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Gm43935-201ENSMUST00000203569 1050 ntBASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.01
Scaf1Q5U4C3 Gm8784-201ENSMUST00000222096 1435 ntBASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Gm14140-201ENSMUST00000119999 995 ntBASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Gm15467-201ENSMUST00000120582 445 ntBASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scaf1Q5U4C3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scaf1Q5U4C3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scaf1Q5U4C3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scaf1Q5U4C3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scaf1Q5U4C3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Scaf1Q5U4C3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC21.37■■□□□ 1.01
Scaf1Q5U4C3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC21.37■■□□□ 1.01
Scaf1Q5U4C3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scaf1Q5U4C3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC21.37■■□□□ 1.01
Scaf1Q5U4C3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scaf1Q5U4C3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Scaf1Q5U4C3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scaf1Q5U4C3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scaf1Q5U4C3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Gm45683-201ENSMUST00000210825 1247 ntBASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Gm18622-201ENSMUST00000219361 595 ntBASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 AC154222.1-201ENSMUST00000223882 475 ntBASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scaf1Q5U4C3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms