Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm15427-201ENSMUST00000117288 531 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm5177-201ENSMUST00000183092 997 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm4518-201ENSMUST00000182638 718 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm5186-201ENSMUST00000218781 920 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.88■□□□□ 0.77
Ubr3Q5U430 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr3Q5U430 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr3Q5U430 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr3Q5U430 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr3Q5U430 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ubr3Q5U430 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.87■□□□□ 0.77
Ubr3Q5U430 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.87■□□□□ 0.77
Ubr3Q5U430 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Ubr3Q5U430 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Ubr3Q5U430 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr3Q5U430 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr3Q5U430 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr3Q5U430 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr3Q5U430 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.86■□□□□ 0.77
Ubr3Q5U430 AA543401-201ENSMUST00000164248 1269 ntBASIC19.86■□□□□ 0.77
Ubr3Q5U430 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Mir1895-201ENSMUST00000122615 79 ntBASIC19.86■□□□□ 0.77
Ubr3Q5U430 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.86■□□□□ 0.77
Ubr3Q5U430 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr3Q5U430 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.85■□□□□ 0.77
Ubr3Q5U430 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.85■□□□□ 0.77
Ubr3Q5U430 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr3Q5U430 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.85■□□□□ 0.77
Ubr3Q5U430 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr3Q5U430 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr3Q5U430 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr3Q5U430 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.85■□□□□ 0.77
Ubr3Q5U430 Gm11745-201ENSMUST00000121669 448 ntBASIC19.85■□□□□ 0.77
Ubr3Q5U430 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Ubr3Q5U430 Gm45747-201ENSMUST00000212203 999 ntBASIC19.85■□□□□ 0.77
Ubr3Q5U430 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ubr3Q5U430 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr3Q5U430 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr3Q5U430 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr3Q5U430 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr3Q5U430 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr3Q5U430 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr3Q5U430 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms