Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Gm28033-201ENSMUST00000184224 96 ntBASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav2Q5R1I9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Gm15794-201ENSMUST00000120182 631 ntBASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Gm27741-201ENSMUST00000185060 237 ntBASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav2Q5R1I9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav2Q5R1I9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms