Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-1Q5R1I8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.19□□□□□ -0.62
Trav3-1Q5R1I8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-1Q5R1I8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 AC154266.1-201ENSMUST00000223190 503 ntBASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-1Q5R1I8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms