Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Gm18206-201ENSMUST00000207027 926 ntBASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-2Q5R1I4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Gm25745-201ENSMUST00000174945 133 ntBASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-2Q5R1I4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6-2Q5R1I4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-2Q5R1I4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-2Q5R1I4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms