Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Gm11643-201ENSMUST00000119578 864 ntBASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Gm12821-201ENSMUST00000120022 600 ntBASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-4Q5R1H9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-4Q5R1H9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Gm21956-201ENSMUST00000179946 522 ntBASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-4Q5R1H9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav7d-4Q5R1H9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trav7d-4Q5R1H9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav7d-4Q5R1H9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav7d-4Q5R1H9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-4Q5R1H9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-4Q5R1H9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms