Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Gm7787-201ENSMUST00000216858 688 ntBASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col27a1Q5QNQ9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col27a1Q5QNQ9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm4518-201ENSMUST00000182638 718 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Rprl2-201ENSMUST00000157150 290 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Col27a1Q5QNQ9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col27a1Q5QNQ9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms