Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm1Q52KI8 Gm10576-201ENSMUST00000191927 825 ntBASIC18.43■□□□□ 0.54
Srrm1Q52KI8 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.43■□□□□ 0.54
Srrm1Q52KI8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm1Q52KI8 Gm10355-201ENSMUST00000097146 517 ntBASIC18.43■□□□□ 0.54
Srrm1Q52KI8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm1Q52KI8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm1Q52KI8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
Srrm1Q52KI8 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.43■□□□□ 0.54
Srrm1Q52KI8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm1Q52KI8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm1Q52KI8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Srrm1Q52KI8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm1Q52KI8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm1Q52KI8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm1Q52KI8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Gm27628-201ENSMUST00000184911 107 ntBASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Gm2756-201ENSMUST00000195851 400 ntBASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Gm6089-201ENSMUST00000197666 938 ntBASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Srrm1Q52KI8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.39■□□□□ 0.54
Srrm1Q52KI8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Srrm1Q52KI8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Srrm1Q52KI8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Srrm1Q52KI8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Srrm1Q52KI8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm1Q52KI8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm1Q52KI8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm1Q52KI8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm1Q52KI8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm1Q52KI8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm1Q52KI8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm1Q52KI8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Srrm1Q52KI8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm1Q52KI8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm1Q52KI8 Gm14140-201ENSMUST00000119999 995 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms