Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Gm12644-201ENSMUST00000119935 606 ntBASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h1Q4VGL6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Gm36967-201ENSMUST00000193814 266 ntBASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h1Q4VGL6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Gm15165-201ENSMUST00000118140 502 ntBASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h1Q4VGL6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h1Q4VGL6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Gm13884-201ENSMUST00000118103 829 ntBASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Gm11452-201ENSMUST00000122376 690 ntBASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h1Q4VGL6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rc3h1Q4VGL6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rc3h1Q4VGL6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rc3h1Q4VGL6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rc3h1Q4VGL6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rc3h1Q4VGL6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rc3h1Q4VGL6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.92■□□□□ 0.62
Rc3h1Q4VGL6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rc3h1Q4VGL6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.92■□□□□ 0.62
Rc3h1Q4VGL6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms