Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Herc2Q4U2R1 Notumos-201ENSMUST00000151998 2659 ntBASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 AY702102-202ENSMUST00000194651 1173 ntBASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 AC124732.1-201ENSMUST00000221551 910 ntBASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Gm5366-201ENSMUST00000215494 1338 ntBASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Mir7036b-201ENSMUST00000184791 63 ntBASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Gpr146-202ENSMUST00000053120 1040 ntBASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Gm38318-201ENSMUST00000195769 1706 ntBASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Herc2Q4U2R1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Gm3786-201ENSMUST00000202659 378 ntBASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Gm37374-201ENSMUST00000194954 1829 ntBASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Herc2Q4U2R1 Grk6-206ENSMUST00000224995 2971 ntBASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Gm9172-201ENSMUST00000212092 954 ntBASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Rpph1-201ENSMUST00000175096 319 ntBASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Gm6888-201ENSMUST00000221983 706 ntBASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Gm43272-201ENSMUST00000200599 1584 ntBASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Herc2Q4U2R1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms