Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm10418-201ENSMUST00000100943 576 ntBASIC17.04■□□□□ 0.32
Trim80Q3V061 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trim80Q3V061 Gm38285-201ENSMUST00000192928 922 ntBASIC17.04■□□□□ 0.32
Trim80Q3V061 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim80Q3V061 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trim80Q3V061 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim80Q3V061 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.03■□□□□ 0.32
Trim80Q3V061 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim80Q3V061 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim80Q3V061 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.03■□□□□ 0.32
Trim80Q3V061 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Trim80Q3V061 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim80Q3V061 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim80Q3V061 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim80Q3V061 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim80Q3V061 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim80Q3V061 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.03■□□□□ 0.32
Trim80Q3V061 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim80Q3V061 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim80Q3V061 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim80Q3V061 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim80Q3V061 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim80Q3V061 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim80Q3V061 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim80Q3V061 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim80Q3V061 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.02■□□□□ 0.32
Trim80Q3V061 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim80Q3V061 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim80Q3V061 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim80Q3V061 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim80Q3V061 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim80Q3V061 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Trim80Q3V061 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim80Q3V061 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim80Q3V061 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim80Q3V061 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim80Q3V061 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 Gm43799-201ENSMUST00000201845 579 ntBASIC17.01■□□□□ 0.31
Trim80Q3V061 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim80Q3V061 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.01■□□□□ 0.31
Trim80Q3V061 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim80Q3V061 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.01■□□□□ 0.31
Trim80Q3V061 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.01■□□□□ 0.31
Trim80Q3V061 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim80Q3V061 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim80Q3V061 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim80Q3V061 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim80Q3V061 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim80Q3V061 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim80Q3V061 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim80Q3V061 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim80Q3V061 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim80Q3V061 Gm13401-201ENSMUST00000117074 291 ntBASIC17■□□□□ 0.31
Trim80Q3V061 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 159.4 ms