Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.74■□□□□ 0.43
Snx27Q3UHD6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Snx27Q3UHD6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.74■□□□□ 0.43
Snx27Q3UHD6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Snx27Q3UHD6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Snx27Q3UHD6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Snx27Q3UHD6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snx27Q3UHD6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Snx27Q3UHD6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.73■□□□□ 0.43
Snx27Q3UHD6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snx27Q3UHD6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snx27Q3UHD6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Snx27Q3UHD6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Snx27Q3UHD6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Gm11452-201ENSMUST00000122376 690 ntBASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.7■□□□□ 0.42
Snx27Q3UHD6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snx27Q3UHD6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms