Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Gm12151-201ENSMUST00000121374 290 ntBASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Spg11Q3UHA3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Gm7730-201ENSMUST00000212486 454 ntBASIC15.12■□□□□ 0.01
Spg11Q3UHA3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Gm45167-201ENSMUST00000208007 322 ntBASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Spg11Q3UHA3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Spg11Q3UHA3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.1■□□□□ 0.01
Spg11Q3UHA3 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Spg11Q3UHA3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Spg11Q3UHA3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms