Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Gm27463-201ENSMUST00000183569 57 ntBASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cul4aQ3TCH7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Cul4aQ3TCH7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Gm7370-201ENSMUST00000219471 767 ntBASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.27■□□□□ 0.36
Cul4aQ3TCH7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cul4aQ3TCH7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cul4aQ3TCH7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cul4aQ3TCH7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cul4aQ3TCH7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cul4aQ3TCH7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cul4aQ3TCH7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cul4aQ3TCH7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cul4aQ3TCH7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cul4aQ3TCH7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cul4aQ3TCH7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.24■□□□□ 0.35
Cul4aQ3TCH7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms