Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ptchd3Q0EEE2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ptchd3Q0EEE2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Gm22240-201ENSMUST00000175225 82 ntBASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ptchd3Q0EEE2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptchd3Q0EEE2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.88■□□□□ 0.13
Ptchd3Q0EEE2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms