Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf1Q07802 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf1Q07802 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ebf1Q07802 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.63■□□□□ 0.25
Ebf1Q07802 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf1Q07802 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.63■□□□□ 0.25
Ebf1Q07802 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ebf1Q07802 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ebf1Q07802 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Ebf1Q07802 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ebf1Q07802 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.62■□□□□ 0.25
Ebf1Q07802 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.62■□□□□ 0.25
Ebf1Q07802 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.62■□□□□ 0.25
Ebf1Q07802 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.62■□□□□ 0.25
Ebf1Q07802 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.62■□□□□ 0.25
Ebf1Q07802 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Rps4l-201ENSMUST00000071745 943 ntBASIC16.62■□□□□ 0.25
Ebf1Q07802 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.62■□□□□ 0.25
Ebf1Q07802 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ebf1Q07802 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.62■□□□□ 0.25
Ebf1Q07802 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.62■□□□□ 0.25
Ebf1Q07802 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ebf1Q07802 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.62■□□□□ 0.25
Ebf1Q07802 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ebf1Q07802 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.61■□□□□ 0.25
Ebf1Q07802 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf1Q07802 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf1Q07802 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.61■□□□□ 0.25
Ebf1Q07802 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.61■□□□□ 0.25
Ebf1Q07802 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf1Q07802 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.61■□□□□ 0.25
Ebf1Q07802 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ebf1Q07802 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.61■□□□□ 0.25
Ebf1Q07802 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf1Q07802 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ebf1Q07802 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.6■□□□□ 0.25
Ebf1Q07802 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.6■□□□□ 0.25
Ebf1Q07802 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.6■□□□□ 0.25
Ebf1Q07802 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Rprl3-201ENSMUST00000157400 290 ntBASIC16.6■□□□□ 0.25
Ebf1Q07802 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Gm29707-201ENSMUST00000196325 491 ntBASIC16.6■□□□□ 0.25
Ebf1Q07802 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ebf1Q07802 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Ebf1Q07802 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.59■□□□□ 0.25
Ebf1Q07802 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf1Q07802 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf1Q07802 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf1Q07802 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf1Q07802 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ebf1Q07802 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Ebf1Q07802 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.59■□□□□ 0.25
Ebf1Q07802 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ebf1Q07802 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ebf1Q07802 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf1Q07802 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.59■□□□□ 0.25
Ebf1Q07802 Gm44450-201ENSMUST00000199528 114 ntBASIC16.59■□□□□ 0.25
Ebf1Q07802 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf1Q07802 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf1Q07802 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf1Q07802 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ebf1Q07802 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Ebf1Q07802 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf1Q07802 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.59■□□□□ 0.25
Ebf1Q07802 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf1Q07802 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ebf1Q07802 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf1Q07802 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ebf1Q07802 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms