Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-3P97334 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-3P97334 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.68■□□□□ 0.9
Nkx2-3P97334 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Gm12497-201ENSMUST00000138778 237 ntBASIC20.68■□□□□ 0.9
Nkx2-3P97334 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Gm8000-201ENSMUST00000188378 592 ntBASIC20.68■□□□□ 0.9
Nkx2-3P97334 Gm5264-201ENSMUST00000190584 848 ntBASIC20.68■□□□□ 0.9
Nkx2-3P97334 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nkx2-3P97334 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-3P97334 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Gm13036-201ENSMUST00000117799 748 ntBASIC20.67■□□□□ 0.9
Nkx2-3P97334 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Gm6550-201ENSMUST00000187574 993 ntBASIC20.67■□□□□ 0.9
Nkx2-3P97334 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-3P97334 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nkx2-3P97334 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-3P97334 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-3P97334 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-3P97334 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.66■□□□□ 0.9
Nkx2-3P97334 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.66■□□□□ 0.9
Nkx2-3P97334 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-3P97334 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.66■□□□□ 0.9
Nkx2-3P97334 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-3P97334 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-3P97334 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-3P97334 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-3P97334 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-3P97334 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx2-3P97334 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx2-3P97334 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx2-3P97334 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Nkx2-3P97334 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx2-3P97334 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-3P97334 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-3P97334 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Nkx2-3P97334 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-3P97334 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-3P97334 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-3P97334 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.64■□□□□ 0.89
Nkx2-3P97334 AV026068-213ENSMUST00000223675 1171 ntBASIC20.64■□□□□ 0.89
Nkx2-3P97334 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-3P97334 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-3P97334 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-3P97334 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-3P97334 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-3P97334 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-3P97334 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Nkx2-3P97334 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-3P97334 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-3P97334 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.63■□□□□ 0.89
Nkx2-3P97334 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Nkx2-3P97334 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms