Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim43bP86448 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trim43bP86448 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43bP86448 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim43bP86448 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim43bP86448 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim43bP86448 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trim43bP86448 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.94■□□□□ 0.3
Trim43bP86448 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim43bP86448 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim43bP86448 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim43bP86448 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43bP86448 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim43bP86448 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trim43bP86448 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim43bP86448 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.93■□□□□ 0.3
Trim43bP86448 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trim43bP86448 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim43bP86448 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43bP86448 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43bP86448 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43bP86448 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim43bP86448 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43bP86448 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43bP86448 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim43bP86448 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43bP86448 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.92■□□□□ 0.3
Trim43bP86448 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim43bP86448 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.92■□□□□ 0.3
Trim43bP86448 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43bP86448 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Trim43bP86448 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.92■□□□□ 0.3
Trim43bP86448 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trim43bP86448 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.92■□□□□ 0.3
Trim43bP86448 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim43bP86448 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43bP86448 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim43bP86448 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43bP86448 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43bP86448 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim43bP86448 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.92■□□□□ 0.3
Trim43bP86448 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43bP86448 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43bP86448 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43bP86448 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim43bP86448 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43bP86448 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43bP86448 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim43bP86448 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43bP86448 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim43bP86448 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43bP86448 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43bP86448 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43bP86448 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim43bP86448 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43bP86448 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43bP86448 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.91■□□□□ 0.3
Trim43bP86448 Gm11539-201ENSMUST00000119837 557 ntBASIC16.91■□□□□ 0.3
Trim43bP86448 Gm13436-201ENSMUST00000120418 567 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms