Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccl21aP84444 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ccl21aP84444 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccl21aP84444 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ccl21aP84444 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ccl21aP84444 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.7□□□□□ -0.22
Ccl21aP84444 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccl21aP84444 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.7□□□□□ -0.22
Ccl21aP84444 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Gm8396-201ENSMUST00000057361 823 ntBASIC13.7□□□□□ -0.22
Ccl21aP84444 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl21aP84444 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccl21aP84444 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl21aP84444 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl21aP84444 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.69□□□□□ -0.22
Ccl21aP84444 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl21aP84444 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Ccl21aP84444 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ccl21aP84444 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl21aP84444 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.69□□□□□ -0.22
Ccl21aP84444 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccl21aP84444 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccl21aP84444 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccl21aP84444 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.69□□□□□ -0.22
Ccl21aP84444 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl21aP84444 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.69□□□□□ -0.22
Ccl21aP84444 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl21aP84444 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.69□□□□□ -0.22
Ccl21aP84444 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl21aP84444 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl21aP84444 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl21aP84444 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl21aP84444 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl21aP84444 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccl21aP84444 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl21aP84444 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccl21aP84444 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccl21aP84444 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccl21aP84444 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccl21aP84444 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.68□□□□□ -0.22
Ccl21aP84444 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Ccl21aP84444 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccl21aP84444 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccl21aP84444 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccl21aP84444 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccl21aP84444 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccl21aP84444 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl21aP84444 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Ccl21aP84444 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.67□□□□□ -0.22
Ccl21aP84444 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.67□□□□□ -0.22
Ccl21aP84444 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.67□□□□□ -0.22
Ccl21aP84444 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.67□□□□□ -0.22
Ccl21aP84444 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.67□□□□□ -0.22
Ccl21aP84444 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.67□□□□□ -0.22
Ccl21aP84444 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl21aP84444 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl21aP84444 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccl21aP84444 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccl21aP84444 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms