Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Shox2P70390 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shox2P70390 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shox2P70390 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shox2P70390 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Shox2P70390 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shox2P70390 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.34■□□□□ 0.21
Shox2P70390 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Shox2P70390 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.34■□□□□ 0.21
Shox2P70390 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.34■□□□□ 0.21
Shox2P70390 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.34■□□□□ 0.21
Shox2P70390 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shox2P70390 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shox2P70390 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Shox2P70390 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Shox2P70390 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shox2P70390 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.33■□□□□ 0.21
Shox2P70390 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shox2P70390 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shox2P70390 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shox2P70390 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.21
Shox2P70390 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Shox2P70390 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Shox2P70390 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.33■□□□□ 0.2
Shox2P70390 Gm27000-201ENSMUST00000182943 842 ntBASIC16.33■□□□□ 0.2
Shox2P70390 Gm10138-203ENSMUST00000206952 366 ntBASIC16.33■□□□□ 0.2
Shox2P70390 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Shox2P70390 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shox2P70390 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Shox2P70390 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shox2P70390 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Shox2P70390 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shox2P70390 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shox2P70390 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shox2P70390 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shox2P70390 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Shox2P70390 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Shox2P70390 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.32■□□□□ 0.2
Shox2P70390 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.32■□□□□ 0.2
Shox2P70390 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.32■□□□□ 0.2
Shox2P70390 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.32■□□□□ 0.2
Shox2P70390 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shox2P70390 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.31■□□□□ 0.2
Shox2P70390 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Shox2P70390 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Shox2P70390 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Shox2P70390 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.31■□□□□ 0.2
Shox2P70390 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.31■□□□□ 0.2
Shox2P70390 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Shox2P70390 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Gm17661-201ENSMUST00000170317 270 ntBASIC16.31■□□□□ 0.2
Shox2P70390 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 BC037039-201ENSMUST00000192003 2205 ntBASIC16.31■□□□□ 0.2
Shox2P70390 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.31■□□□□ 0.2
Shox2P70390 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.31■□□□□ 0.2
Shox2P70390 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Shox2P70390 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shox2P70390 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.3■□□□□ 0.2
Shox2P70390 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shox2P70390 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms