Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC26.84■■□□□ 1.89
Cux2P70298 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Cux2P70298 Gm11185-201ENSMUST00000117732 1007 ntBASIC26.84■■□□□ 1.89
Cux2P70298 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
Cux2P70298 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
Cux2P70298 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Cux2P70298 Gm43474-201ENSMUST00000196415 774 ntBASIC26.84■■□□□ 1.89
Cux2P70298 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC26.84■■□□□ 1.89
Cux2P70298 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cux2P70298 AC132265.1-201ENSMUST00000219233 1665 ntBASIC26.84■■□□□ 1.89
Cux2P70298 Nrn1-204ENSMUST00000224323 1779 ntBASIC26.84■■□□□ 1.89
Cux2P70298 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cux2P70298 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cux2P70298 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cux2P70298 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cux2P70298 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cux2P70298 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC26.83■■□□□ 1.89
Cux2P70298 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
Cux2P70298 Mir6990-201ENSMUST00000183724 91 ntBASIC26.83■■□□□ 1.89
Cux2P70298 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Cux2P70298 Gm5626-201ENSMUST00000222151 1058 ntBASIC26.83■■□□□ 1.89
Cux2P70298 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cux2P70298 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cux2P70298 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cux2P70298 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cux2P70298 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cux2P70298 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Cux2P70298 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cux2P70298 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cux2P70298 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.88
Cux2P70298 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Cux2P70298 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
Cux2P70298 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC26.82■■□□□ 1.88
Cux2P70298 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC26.82■■□□□ 1.88
Cux2P70298 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cux2P70298 Fgf17-202ENSMUST00000227123 1336 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cux2P70298 Gm4609-201ENSMUST00000106443 1002 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gm5138-201ENSMUST00000113842 1002 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gm15191-201ENSMUST00000117933 1000 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gm12182-201ENSMUST00000118655 1008 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gm13882-201ENSMUST00000120886 1002 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC26.82■■□□□ 1.88
Cux2P70298 Gm10284-201ENSMUST00000145057 1005 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gm10481-201ENSMUST00000179228 1002 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gm2574-201ENSMUST00000181051 1002 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gm3200-201ENSMUST00000181493 1002 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gm4518-201ENSMUST00000182638 718 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gm8330-201ENSMUST00000182754 1008 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gm4575-201ENSMUST00000182991 1002 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gm8709-201ENSMUST00000183230 1012 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cux2P70298 Gm10293-201ENSMUST00000076317 1002 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Gm6316-201ENSMUST00000082064 1020 ntBASIC26.82■■□□□ 1.88
Cux2P70298 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Cux2P70298 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC26.81■■□□□ 1.88
Cux2P70298 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC26.81■■□□□ 1.88
Cux2P70298 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
Cux2P70298 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
Cux2P70298 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
Cux2P70298 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
Cux2P70298 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cux2P70298 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cux2P70298 Gm16499-203ENSMUST00000204633 2177 ntBASIC26.81■■□□□ 1.88
Cux2P70298 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cux2P70298 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC26.81■■□□□ 1.88
Cux2P70298 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cux2P70298 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC26.81■■□□□ 1.88
Cux2P70298 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC26.81■■□□□ 1.88
Cux2P70298 Gm9682-201ENSMUST00000197505 556 ntBASIC26.81■■□□□ 1.88
Cux2P70298 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cux2P70298 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC26.81■■□□□ 1.88
Cux2P70298 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cux2P70298 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cux2P70298 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cux2P70298 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Cux2P70298 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Cux2P70298 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cux2P70298 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Cux2P70298 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC26.8■■□□□ 1.88
Cux2P70298 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Cux2P70298 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
Cux2P70298 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cux2P70298 Gm12428-201ENSMUST00000119844 727 ntBASIC26.8■■□□□ 1.88
Cux2P70298 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC26.8■■□□□ 1.88
Cux2P70298 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC26.79■■□□□ 1.88
Cux2P70298 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Cux2P70298 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cux2P70298 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cux2P70298 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cux2P70298 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC26.79■■□□□ 1.88
Cux2P70298 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC26.79■■□□□ 1.88
Cux2P70298 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cux2P70298 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cux2P70298 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cux2P70298 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Cux2P70298 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cux2P70298 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cux2P70298 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC26.78■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms