Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ybx1P62960 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ybx1P62960 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ybx1P62960 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ybx1P62960 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ybx1P62960 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ybx1P62960 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ybx1P62960 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ybx1P62960 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ybx1P62960 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.82■□□□□ 0.28
Ybx1P62960 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Ybx1P62960 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ybx1P62960 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Ybx1P62960 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ybx1P62960 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ybx1P62960 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ybx1P62960 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ybx1P62960 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ybx1P62960 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ybx1P62960 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ybx1P62960 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ybx1P62960 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.81■□□□□ 0.28
Ybx1P62960 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.81■□□□□ 0.28
Ybx1P62960 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ybx1P62960 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ybx1P62960 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.81■□□□□ 0.28
Ybx1P62960 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.81■□□□□ 0.28
Ybx1P62960 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Gm10060-201ENSMUST00000212002 111 ntBASIC16.81■□□□□ 0.28
Ybx1P62960 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.81■□□□□ 0.28
Ybx1P62960 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ybx1P62960 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ybx1P62960 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.8■□□□□ 0.28
Ybx1P62960 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ybx1P62960 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ybx1P62960 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Gm12350-201ENSMUST00000121208 462 ntBASIC16.8■□□□□ 0.28
Ybx1P62960 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ybx1P62960 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.8■□□□□ 0.28
Ybx1P62960 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.8■□□□□ 0.28
Ybx1P62960 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.8■□□□□ 0.28
Ybx1P62960 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ybx1P62960 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ybx1P62960 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ybx1P62960 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ybx1P62960 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Ybx1P62960 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.79■□□□□ 0.28
Ybx1P62960 Gm25745-201ENSMUST00000174945 133 ntBASIC16.79■□□□□ 0.28
Ybx1P62960 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Ybx1P62960 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.79■□□□□ 0.28
Ybx1P62960 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.79■□□□□ 0.28
Ybx1P62960 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ybx1P62960 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms