Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a1P61620 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Sec61a1P61620 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sec61a1P61620 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sec61a1P61620 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sec61a1P61620 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sec61a1P61620 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
Sec61a1P61620 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.52□□□□□ -0.08
Sec61a1P61620 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 Gm13401-201ENSMUST00000117074 291 ntBASIC14.52□□□□□ -0.09
Sec61a1P61620 Gm11643-201ENSMUST00000119578 864 ntBASIC14.52□□□□□ -0.09
Sec61a1P61620 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 Timm23-208ENSMUST00000226683 750 ntBASIC14.52□□□□□ -0.09
Sec61a1P61620 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Sec61a1P61620 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sec61a1P61620 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.52□□□□□ -0.09
Sec61a1P61620 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sec61a1P61620 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sec61a1P61620 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Sec61a1P61620 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a1P61620 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Sec61a1P61620 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.51□□□□□ -0.09
Sec61a1P61620 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.51□□□□□ -0.09
Sec61a1P61620 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.51□□□□□ -0.09
Sec61a1P61620 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.51□□□□□ -0.09
Sec61a1P61620 Gm12085-201ENSMUST00000119263 940 ntBASIC14.51□□□□□ -0.09
Sec61a1P61620 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Sec61a1P61620 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.51□□□□□ -0.09
Sec61a1P61620 Gm3375-201ENSMUST00000203929 796 ntBASIC14.51□□□□□ -0.09
Sec61a1P61620 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.51□□□□□ -0.09
Sec61a1P61620 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.51□□□□□ -0.09
Sec61a1P61620 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a1P61620 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sec61a1P61620 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sec61a1P61620 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Sec61a1P61620 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Sec61a1P61620 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.5□□□□□ -0.09
Sec61a1P61620 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sec61a1P61620 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.5□□□□□ -0.09
Sec61a1P61620 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 Gm43799-201ENSMUST00000201845 579 ntBASIC14.5□□□□□ -0.09
Sec61a1P61620 Gm30025-201ENSMUST00000218555 728 ntBASIC14.5□□□□□ -0.09
Sec61a1P61620 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.5□□□□□ -0.09
Sec61a1P61620 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sec61a1P61620 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Sec61a1P61620 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a1P61620 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a1P61620 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a1P61620 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a1P61620 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a1P61620 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a1P61620 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sec61a1P61620 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a1P61620 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sec61a1P61620 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms