Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nub1P54729 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.71■□□□□ 0.43
Nub1P54729 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nub1P54729 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nub1P54729 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nub1P54729 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Nub1P54729 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.7■□□□□ 0.42
Nub1P54729 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Nub1P54729 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Gm23634-201ENSMUST00000175071 91 ntBASIC17.7■□□□□ 0.42
Nub1P54729 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Nub1P54729 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nub1P54729 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nub1P54729 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.69■□□□□ 0.42
Nub1P54729 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Nub1P54729 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Nub1P54729 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Nub1P54729 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Nub1P54729 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.69■□□□□ 0.42
Nub1P54729 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Nub1P54729 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.69■□□□□ 0.42
Nub1P54729 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nub1P54729 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nub1P54729 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nub1P54729 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.68■□□□□ 0.42
Nub1P54729 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.68■□□□□ 0.42
Nub1P54729 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.68■□□□□ 0.42
Nub1P54729 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.68■□□□□ 0.42
Nub1P54729 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.68■□□□□ 0.42
Nub1P54729 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.68■□□□□ 0.42
Nub1P54729 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.68■□□□□ 0.42
Nub1P54729 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nub1P54729 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nub1P54729 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nub1P54729 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nub1P54729 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nub1P54729 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nub1P54729 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nub1P54729 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.67■□□□□ 0.42
Nub1P54729 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.67■□□□□ 0.42
Nub1P54729 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nub1P54729 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms