Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmga2P52927 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmga2P52927 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmga2P52927 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmga2P52927 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hmga2P52927 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hmga2P52927 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmga2P52927 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.03□□□□□ -0.16
Hmga2P52927 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.03□□□□□ -0.16
Hmga2P52927 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.03□□□□□ -0.16
Hmga2P52927 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmga2P52927 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmga2P52927 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.03□□□□□ -0.16
Hmga2P52927 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hmga2P52927 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Hmga2P52927 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hmga2P52927 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.03□□□□□ -0.16
Hmga2P52927 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Hmga2P52927 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.03□□□□□ -0.16
Hmga2P52927 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Hmga2P52927 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmga2P52927 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga2P52927 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga2P52927 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.02□□□□□ -0.16
Hmga2P52927 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga2P52927 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga2P52927 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
Hmga2P52927 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.02□□□□□ -0.16
Hmga2P52927 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga2P52927 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga2P52927 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga2P52927 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga2P52927 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmga2P52927 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.02□□□□□ -0.17
Hmga2P52927 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga2P52927 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hmga2P52927 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga2P52927 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga2P52927 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga2P52927 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga2P52927 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga2P52927 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmga2P52927 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Hmga2P52927 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.01□□□□□ -0.17
Hmga2P52927 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.01□□□□□ -0.17
Hmga2P52927 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.01□□□□□ -0.17
Hmga2P52927 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hmga2P52927 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hmga2P52927 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmga2P52927 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hmga2P52927 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga2P52927 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga2P52927 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmga2P52927 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga2P52927 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hmga2P52927 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14□□□□□ -0.17
Hmga2P52927 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hmga2P52927 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga2P52927 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14□□□□□ -0.17
Hmga2P52927 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga2P52927 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmga2P52927 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms