Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Ercc3P49135 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc3P49135 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.52■□□□□ 0.72
Ercc3P49135 Gm7367-201ENSMUST00000057611 492 ntBASIC19.52■□□□□ 0.72
Ercc3P49135 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc3P49135 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.52■□□□□ 0.72
Ercc3P49135 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ercc3P49135 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc3P49135 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc3P49135 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc3P49135 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc3P49135 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc3P49135 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ercc3P49135 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ercc3P49135 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ercc3P49135 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.52■□□□□ 0.71
Ercc3P49135 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ercc3P49135 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ercc3P49135 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ercc3P49135 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.51■□□□□ 0.71
Ercc3P49135 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc3P49135 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc3P49135 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc3P49135 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc3P49135 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ercc3P49135 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Ercc3P49135 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc3P49135 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc3P49135 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc3P49135 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ercc3P49135 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ercc3P49135 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.5■□□□□ 0.71
Ercc3P49135 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ercc3P49135 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ercc3P49135 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.5■□□□□ 0.71
Ercc3P49135 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.5■□□□□ 0.71
Ercc3P49135 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Ercc3P49135 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.5■□□□□ 0.71
Ercc3P49135 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ercc3P49135 Gm10819-201ENSMUST00000099988 561 ntBASIC19.5■□□□□ 0.71
Ercc3P49135 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc3P49135 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ercc3P49135 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc3P49135 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc3P49135 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc3P49135 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ercc3P49135 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc3P49135 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.49■□□□□ 0.71
Ercc3P49135 Gm21362-201ENSMUST00000194272 928 ntBASIC19.49■□□□□ 0.71
Ercc3P49135 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ercc3P49135 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc3P49135 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc3P49135 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ercc3P49135 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc3P49135 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc3P49135 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc3P49135 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc3P49135 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc3P49135 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc3P49135 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc3P49135 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc3P49135 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.48■□□□□ 0.71
Ercc3P49135 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ercc3P49135 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc3P49135 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc3P49135 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.48■□□□□ 0.71
Ercc3P49135 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc3P49135 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc3P49135 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Ercc3P49135 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc3P49135 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ercc3P49135 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Ercc3P49135 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.48■□□□□ 0.71
Ercc3P49135 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.48■□□□□ 0.71
Ercc3P49135 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc3P49135 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc3P49135 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ercc3P49135 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc3P49135 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ercc3P49135 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc3P49135 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.47■□□□□ 0.71
Ercc3P49135 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc3P49135 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc3P49135 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.47■□□□□ 0.71
Ercc3P49135 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.47■□□□□ 0.71
Ercc3P49135 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms