Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm8097-201ENSMUST00000117903 829 ntBASIC15.75■□□□□ 0.11
Sox18P43680 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.75■□□□□ 0.11
Sox18P43680 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.75■□□□□ 0.11
Sox18P43680 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
Sox18P43680 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.75■□□□□ 0.11
Sox18P43680 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.75■□□□□ 0.11
Sox18P43680 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
Sox18P43680 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.75■□□□□ 0.11
Sox18P43680 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.75■□□□□ 0.11
Sox18P43680 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox18P43680 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.74■□□□□ 0.11
Sox18P43680 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.74■□□□□ 0.11
Sox18P43680 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sox18P43680 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.74■□□□□ 0.11
Sox18P43680 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Sox18P43680 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Sox18P43680 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox18P43680 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.74■□□□□ 0.11
Sox18P43680 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Sox18P43680 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Gm13418-201ENSMUST00000119097 944 ntBASIC15.73■□□□□ 0.11
Sox18P43680 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.73■□□□□ 0.11
Sox18P43680 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Gm4535-201ENSMUST00000182274 558 ntBASIC15.73■□□□□ 0.11
Sox18P43680 Gm6089-201ENSMUST00000197666 938 ntBASIC15.73■□□□□ 0.11
Sox18P43680 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.73■□□□□ 0.11
Sox18P43680 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.73■□□□□ 0.11
Sox18P43680 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.73■□□□□ 0.11
Sox18P43680 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Gm10355-201ENSMUST00000097146 517 ntBASIC15.73■□□□□ 0.11
Sox18P43680 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Sox18P43680 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Sox18P43680 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox18P43680 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.72■□□□□ 0.11
Sox18P43680 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.72■□□□□ 0.11
Sox18P43680 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.72■□□□□ 0.11
Sox18P43680 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Sox18P43680 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.72■□□□□ 0.11
Sox18P43680 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.72■□□□□ 0.11
Sox18P43680 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.72■□□□□ 0.11
Sox18P43680 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Sox18P43680 Mir8112-201ENSMUST00000184382 131 ntBASIC15.72■□□□□ 0.11
Sox18P43680 AV026068-213ENSMUST00000223675 1171 ntBASIC15.72■□□□□ 0.11
Sox18P43680 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.72■□□□□ 0.11
Sox18P43680 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.72■□□□□ 0.11
Sox18P43680 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox18P43680 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms