Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HttP42859 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.52■□□□□ 0.4
HttP42859 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HttP42859 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HttP42859 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.52■□□□□ 0.4
HttP42859 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.52■□□□□ 0.4
HttP42859 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HttP42859 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HttP42859 Gm15427-201ENSMUST00000117288 531 ntBASIC17.52■□□□□ 0.4
HttP42859 Gm13823-201ENSMUST00000119930 345 ntBASIC17.52■□□□□ 0.4
HttP42859 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.52■□□□□ 0.4
HttP42859 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.52■□□□□ 0.4
HttP42859 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HttP42859 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HttP42859 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HttP42859 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HttP42859 Gm5177-201ENSMUST00000183092 997 ntBASIC17.52■□□□□ 0.39
HttP42859 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.51■□□□□ 0.39
HttP42859 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HttP42859 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.51■□□□□ 0.39
HttP42859 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.51■□□□□ 0.39
HttP42859 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.51■□□□□ 0.39
HttP42859 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HttP42859 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.51■□□□□ 0.39
HttP42859 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HttP42859 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.51■□□□□ 0.39
HttP42859 Gm27301-201ENSMUST00000184012 127 ntBASIC17.51■□□□□ 0.39
HttP42859 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HttP42859 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HttP42859 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.51■□□□□ 0.39
HttP42859 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.5■□□□□ 0.39
HttP42859 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.5■□□□□ 0.39
HttP42859 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 Gm7653-201ENSMUST00000214567 508 ntBASIC17.5■□□□□ 0.39
HttP42859 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
HttP42859 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.5■□□□□ 0.39
HttP42859 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.5■□□□□ 0.39
HttP42859 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.5■□□□□ 0.39
HttP42859 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HttP42859 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HttP42859 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HttP42859 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HttP42859 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HttP42859 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HttP42859 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HttP42859 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HttP42859 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HttP42859 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HttP42859 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HttP42859 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HttP42859 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HttP42859 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HttP42859 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HttP42859 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HttP42859 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HttP42859 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HttP42859 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.48■□□□□ 0.39
HttP42859 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HttP42859 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HttP42859 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HttP42859 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HttP42859 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HttP42859 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HttP42859 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HttP42859 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HttP42859 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HttP42859 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HttP42859 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.48■□□□□ 0.39
HttP42859 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.48■□□□□ 0.39
HttP42859 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HttP42859 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.48■□□□□ 0.39
HttP42859 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.48■□□□□ 0.39
HttP42859 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HttP42859 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms