Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmx3P42581 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmx3P42581 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmx3P42581 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmx3P42581 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmx3P42581 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Hmx3P42581 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hmx3P42581 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmx3P42581 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmx3P42581 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmx3P42581 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmx3P42581 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmx3P42581 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmx3P42581 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.78□□□□□ -0.2
Hmx3P42581 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hmx3P42581 Gm29791-202ENSMUST00000207888 369 ntBASIC13.78□□□□□ -0.2
Hmx3P42581 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Hmx3P42581 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmx3P42581 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.77□□□□□ -0.2
Hmx3P42581 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hmx3P42581 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Hmx3P42581 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.77□□□□□ -0.2
Hmx3P42581 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hmx3P42581 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hmx3P42581 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.77□□□□□ -0.2
Hmx3P42581 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Hmx3P42581 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Hmx3P42581 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Hmx3P42581 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Hmx3P42581 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.77□□□□□ -0.21
Hmx3P42581 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hmx3P42581 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Hmx3P42581 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Hmx3P42581 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Hmx3P42581 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Dio3-201ENSMUST00000097228 1449 ntBASIC13.76□□□□□ -0.21
Hmx3P42581 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.76□□□□□ -0.21
Hmx3P42581 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Hmx3P42581 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.76□□□□□ -0.21
Hmx3P42581 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Hmx3P42581 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Hmx3P42581 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hmx3P42581 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.76□□□□□ -0.21
Hmx3P42581 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Hmx3P42581 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hmx3P42581 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hmx3P42581 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.75□□□□□ -0.21
Hmx3P42581 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Hmx3P42581 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.75□□□□□ -0.21
Hmx3P42581 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms