Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.39■□□□□ 0.21
LdlrP35951 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.39■□□□□ 0.21
LdlrP35951 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LdlrP35951 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.39■□□□□ 0.21
LdlrP35951 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LdlrP35951 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LdlrP35951 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.38■□□□□ 0.21
LdlrP35951 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LdlrP35951 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.38■□□□□ 0.21
LdlrP35951 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.38■□□□□ 0.21
LdlrP35951 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.38■□□□□ 0.21
LdlrP35951 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.38■□□□□ 0.21
LdlrP35951 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LdlrP35951 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.37■□□□□ 0.21
LdlrP35951 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LdlrP35951 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.37■□□□□ 0.21
LdlrP35951 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.37■□□□□ 0.21
LdlrP35951 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LdlrP35951 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
LdlrP35951 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LdlrP35951 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.36■□□□□ 0.21
LdlrP35951 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
LdlrP35951 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LdlrP35951 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LdlrP35951 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.35■□□□□ 0.21
LdlrP35951 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LdlrP35951 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms