Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a13P31649 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.71■□□□□ 0.27
Slc6a13P31649 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a13P31649 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.71■□□□□ 0.27
Slc6a13P31649 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a13P31649 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a13P31649 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Slc6a13P31649 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a13P31649 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a13P31649 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a13P31649 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
Slc6a13P31649 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a13P31649 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Slc6a13P31649 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a13P31649 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slc6a13P31649 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Slc6a13P31649 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.71■□□□□ 0.26
Slc6a13P31649 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Slc6a13P31649 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Slc6a13P31649 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.7■□□□□ 0.26
Slc6a13P31649 Gm6623-201ENSMUST00000173570 544 ntBASIC16.7■□□□□ 0.26
Slc6a13P31649 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.7■□□□□ 0.26
Slc6a13P31649 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Slc6a13P31649 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Slc6a13P31649 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Slc6a13P31649 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc6a13P31649 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.69■□□□□ 0.26
Slc6a13P31649 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Slc6a13P31649 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Slc6a13P31649 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Slc6a13P31649 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Gm17808-201ENSMUST00000200859 894 ntBASIC16.69■□□□□ 0.26
Slc6a13P31649 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Slc6a13P31649 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Slc6a13P31649 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Slc6a13P31649 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Slc6a13P31649 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc6a13P31649 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Slc6a13P31649 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Slc6a13P31649 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Slc6a13P31649 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Gm29518-201ENSMUST00000190858 372 ntBASIC16.68■□□□□ 0.26
Slc6a13P31649 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Slc6a13P31649 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Slc6a13P31649 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc6a13P31649 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms