Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm3P21107 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm3P21107 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Tpm3P21107 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm3P21107 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm3P21107 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm3P21107 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm3P21107 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm3P21107 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Tpm3P21107 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm3P21107 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Tpm3P21107 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.51■□□□□ 0.55
Tpm3P21107 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm3P21107 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.5■□□□□ 0.55
Tpm3P21107 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm3P21107 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm3P21107 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.5■□□□□ 0.55
Tpm3P21107 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
Tpm3P21107 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm3P21107 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm3P21107 Prob1-201ENSMUST00000097619 3021 ntBASIC18.5■□□□□ 0.55
Tpm3P21107 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.5■□□□□ 0.55
Tpm3P21107 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Tpm3P21107 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm3P21107 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm3P21107 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Tpm3P21107 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm3P21107 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.5■□□□□ 0.55
Tpm3P21107 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm3P21107 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm3P21107 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tpm3P21107 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Tpm3P21107 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Tpm3P21107 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.49■□□□□ 0.55
Tpm3P21107 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Tpm3P21107 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.49■□□□□ 0.55
Tpm3P21107 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.49■□□□□ 0.55
Tpm3P21107 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Tpm3P21107 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Tpm3P21107 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tpm3P21107 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm3P21107 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Tpm3P21107 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Tpm3P21107 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Tpm3P21107 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.48■□□□□ 0.55
Tpm3P21107 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.48■□□□□ 0.55
Tpm3P21107 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.48■□□□□ 0.55
Tpm3P21107 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.48■□□□□ 0.55
Tpm3P21107 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Tpm3P21107 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm3P21107 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Tpm3P21107 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Tpm3P21107 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Tpm3P21107 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.47■□□□□ 0.55
Tpm3P21107 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tpm3P21107 Gm6576-201ENSMUST00000169678 883 ntBASIC18.47■□□□□ 0.55
Tpm3P21107 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm3P21107 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.47■□□□□ 0.55
Tpm3P21107 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms